Insertion junction: CLIP2.062952_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.062952
Chromosome:chromosome 3
Location:3724964
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre03.g169050 (1 of 1) PTHR12183//PTHR12183:SF18 - UNCHARACTERIZED RING ZINC FINGER-CONTAINING PROTEIN // RING-TYPE UBIQUITIN E3 LIGASE CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGTCCTCCTAAGAGAGAAAGGGTGGTGAGGAGGGACGCGGGAAAAAAGG
Internal bar code:TATAGGACTCGGATTAGGTCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:246
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CCAATGCTGTTTGTGGGGTG
Suggested primer 2:GACATAGCTCGCCGATGACA