Insertion junction: CLIP2.062962_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.062962
Chromosome:chromosome 10
Location:2870985
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g439550 (1 of 4) PF07534 - TLD (TLD) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGAGGTCGCCGTGGCTCGTTCTCGTGACACAAAGCAAACACATATAGTT
Internal bar code:AGCTTTACGGTCTTATAGTCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1336
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:CCACCGATGTTGGTCACGTA
Suggested primer 2:CCTCCCACGCTTTGTTTGTG