Insertion junction: CLIP2.062965_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.062965
Chromosome:chromosome 6
Location:1614208
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g261550 (1 of 1) PF06694 - Plant nuclear matrix protein 1 (NMP1) (Plant_NMP1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCAAGCCATCCGTAATGCCGTCTCAGAGCTTTGATAAAAAAAATGCCCG
Internal bar code:TTGCTGGTTGAAAGAGGTTCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:4636
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:GTACCTGTGTGTTCGCCTCA
Suggested primer 2:GTGCTTGGTGACTGTGCTTG