Insertion junction: CLIP2.062966_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.062966
Chromosome:chromosome 9
Location:3341896
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g395473 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTGTCATCGCCACACGTGTCCTCAGCCCAAGCATCTTCAGCCGTGCGC
Internal bar code:CATTTATACAAGTGCGACCAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:866
LEAP-Seq percent confirming:72.7273
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCCGCAGAGGATTCCTAG
Suggested primer 2:CGCTGCCTAAATGAATGGCC