Insertion junction: CLIP2.062967_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.062967
Chromosome:chromosome 9
Location:3666569
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre09.g397142 ADF1,TRP15 (1 of 6) PTHR10117 - TRANSIENT RECEPTOR POTENTIAL CHANNEL; Acid-induced Ca transient receptor channel intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAACTCCCCCCGCTAATCTGGCTTGTTTGGTATAGTTTGGGCTGGTATT
Internal bar code:ATGGATAGTGGTGTTTTTTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:201
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GAGTTGAAGAAGGCCACGGA
Suggested primer 2:GTGCGTGTGTGTCTTTGTCC