Insertion junction: CLIP2.062970_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.062970
Chromosome:chromosome 9
Location:2598469
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g392400 SEC24C (1 of 15) IPR011053 - Single hybrid motif; COP-II coat subunit 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGAGGGCAGTGGGCACTTGCACGTTAGCTTAGGAGGAATAAACAGATT
Internal bar code:GGAACTAACGGGTCCGGGTCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1209
LEAP-Seq percent confirming:80.6452
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:ACTAACCTCAGTGCAGGCAC
Suggested primer 2:ACATCCGTAAACCGTCGCTT