Insertion junction: CLIP2.062974_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.062974
Chromosome:chromosome 8
Location:3449530
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g378450 (1 of 1) IPR000104//IPR000679 - Antifreeze protein, type I // Zinc finger, GATA-type 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCAAAGCAAAGACGACTGGCGACAAGACTAGCTAGAGTAATATGCCGT
Internal bar code:AGGTGCGCAAATTGGTCACAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1703
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGTGCTGTTGTGTGTGAG
Suggested primer 2:GCATTTGCATCCACAACCGT