Insertion junction: CLIP2.062976_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.062976
Chromosome:chromosome 10
Location:2776840
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g438350 LTH3 LAT2 homolog 3'UTR
Cre10.g438400 LTH2 LAT2 homolog 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGGCAGGGCAGTATCGCATCCATCTTCGACAATGACCAGTTCCATGCAT
Internal bar code:GGGGGGTGCCTGCAGGGGGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:6203
LEAP-Seq percent confirming:97.5
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTATGTCGCTGCGAAGGT
Suggested primer 2:GTGGAGGACATGGAGTGGTG