Insertion junction: CLIP2.062976_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.062976
Chromosome:chromosome 10
Location:2776841
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g438350 LTH3 LAT2 homolog 3'UTR
Cre10.g438400 LTH2 LAT2 homolog 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTACAACACAATGATGACCAGGGCCCAGTTGAGTTCCATTCGCCTGCTG
Internal bar code:GGGGGGTGCCTGCAGGGGGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2515
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGAGGACATGGAGTGGTG
Suggested primer 2:TGTTATGTCGCTGCGAAGGT