Insertion junction: CLIP2.062985_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.062985
Chromosome:chromosome 8
Location:3487427
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g378850 RPPK1 (1 of 1) K00948 - ribose-phosphate pyrophosphokinase (PRPS, prsA); Ribose-phosphate pyrophosphokinase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGCCCCTGCATGCACGGTTACATGTGTGCAGAGCGTCTGAACCGAGGA
Internal bar code:GTCTCTAAGATGTGAACAGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2278
LEAP-Seq percent confirming:97.0588
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:CGTTGCCAAGTATGCATCGG
Suggested primer 2:AACTCTGGACGTGACGACAC