Insertion junction: CLIP2.062988_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.062988
Chromosome:chromosome 5
Location:3524956
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g233600 DIV55 [RNA-polymerase]-subunit kinase / CTD kinase; (1 of 13) 2.7.11.23 - [RNA-polymerase]-subunit kinase / CTD kinase 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGAAAAGCCCGTTAGCTCAGCAGAAACTGATGTTACATACATGAATGAGC
Internal bar code:GGACGTAAGTCCATGGTTGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:495
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGCTAGGTGGCATTCGTT
Suggested primer 2:AGTTCAACGGTTTTCGCTGC