Insertion junction: CLIP2.062996_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.062996
Chromosome:chromosome 10
Location:1628003
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g429350 (1 of 6) 3.4.22.69 - SARS coronavirus main proteinase / Severe acute respiratory syndrome coronavirus main protease 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTGCTAGCACTTGCTGCATCCACGCTCCTCGGTCTGGCGCTCTTACAG
Internal bar code:TCATGGCTTCACTTAGTAAGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2364
LEAP-Seq percent confirming:93.9024
LEAP-Seq n confirming:77
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:82

Suggested primers for confirmation by PCR

Suggested primer 1:GGATGAGAGCTCGGACGAAG
Suggested primer 2:GCTGCAACGGCCATAACAAA