Insertion junction: CLIP2.062997_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.062997
Chromosome:chromosome 3
Location:3870066
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g170450 (1 of 239) IPR016024 - Armadillo-type fold 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTATCGCAGCGGTGAGCACAGAGCAGGATTGGGAGGGCGGTAGCGGCGC
Internal bar code:TAAGTTTAGCCGTCAGTTAAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2637
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTGCAGTTGTGTTTCGGG
Suggested primer 2:CATCCGCATGACTCGCTTTG