Insertion junction: CLIP2.062998_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.062998
Chromosome:chromosome 3
Location:3867436
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g170428 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAATATCGCAATTCTGCATGAAAAATTACATCTCGGCCAAAGCTGGTTGC
Internal bar code:ACTTCGCCTGACAATGCATTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:203
LEAP-Seq percent confirming:61.5385
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TTACGTATGCGGATGTCGGG
Suggested primer 2:GCACCCGACGGATCTCATAG