Insertion junction: CLIP2.063003_4

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.063003
Chromosome:chromosome 13
Location:2889926
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g583300 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTATGTATGCACGAGCAGCTCTCGCCATCCTACTTCCATCTACTCTTT
Internal bar code:ATCAAGTGGAAATGGAAACCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:695
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TGAGAGAAAGCCCGCTTGAG
Suggested primer 2:GCTGTTGTGCACATGCTGAA