Insertion junction: CLIP2.063007_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.063007
Chromosome:chromosome 17
Location:921223
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g702800 3'UTR
Cre17.g802030 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTTGCAAACATTGCTGCAGCGCTGCCCAGCGCCCCACCGAAGGATTGGC
Internal bar code:CACGGGATGGAACTAAGTAGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1830
LEAP-Seq percent confirming:97.6744
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:GACGCTCTCATAGGTTCCCG
Suggested primer 2:GGCGTTTGAGCTCCTTACCT