Insertion junction: CLIP2.063008_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.063008
Chromosome:chromosome 12
Location:8109110
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g552450 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAAACACTTTTGACTCATCGCAACCAATTGCCGAAGAGTTCCTGCCAGG
Internal bar code:CCCCCGAGCGTCACACGGTTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1537
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:CATCAGGAAGCTCACCAGGG
Suggested primer 2:CAGAGACCTTGACCTGCCTG