Insertion junction: CLIP2.063011_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.063011
Chromosome:chromosome 13
Location:5102208
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g606800 (1 of 2) PTHR30336//PTHR30336:SF4 - INNER MEMBRANE PROTEIN, PROBABLE PERMEASE // SUBFAMILY NOT NAMED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGTCCTAGGAATGCTCGGTAAGACTACTGCAATGGATGAGTGATGAAA
Internal bar code:ATTTATTGGTCATTGGGTTTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1997
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:ACTCAGCCGTTTGACATCGT
Suggested primer 2:CCCCTCACCCAGTGATAGGA