Insertion junction: CLIP2.063014_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.063014
Chromosome:chromosome 13
Location:3807324
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g589100 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAGCGTAGATGGACGATACGAGCACTGGGCGCTAGCCCTGTGGCCTGCC
Internal bar code:CGGGCCTTCTCGCGCCAGCGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2725
LEAP-Seq percent confirming:96.1538
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GTCAGGCCAGGTGTTGCTAT
Suggested primer 2:CTTGGGCGGGTGAATTTTGG