Insertion junction: CLIP2.063014_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.063014
Chromosome:chromosome 13
Location:3807330
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g589100 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCCCCAAATCCGCCGAAGGCGGAGTAATATTTTGGGGTCTGGGGCCGC
Internal bar code:CGGGCCTTCTCGCGCCAGCGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2686
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGGGCGGGTGAATTTTGG
Suggested primer 2:GTCAGGCCAGGTGTTGCTAT