Insertion junction: CLIP2.063015_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.063015
Chromosome:chromosome 9
Location:5863125
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g411700 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGTCCTTGTATGCATAAATGATCAAGTTCCACAAGAACTCGAGCCCCTG
Internal bar code:CGGCTCAGCTTCTAAGATGATT

Confirmation - LEAP-Seq

LEAP-Seq distance:2063
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CATTCTGGGGGAGTGCCATT
Suggested primer 2:GCATGCTGCCTTCACACAAA