Insertion junction: CLIP2.063020_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.063020
Chromosome:chromosome 3
Location:6979682
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g198500 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGCAGAAGGCATGGGTTTGCCGTTTAAGTTCATTGTGGTGTGATACTT
Internal bar code:TTATGTAAATTATGATGATCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3049
LEAP-Seq percent confirming:52.459
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:29
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:CCCAGCCACCACGTAAGAAT
Suggested primer 2:GTTGCCCTTGGGGTAGTACC