Insertion junction: CLIP2.063023_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.063023
Chromosome:chromosome 16
Location:128702
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g695300 (1 of 1) K12878 - THO complex subunit 1 (THOC1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGTGTGGCGGGTGCCTGCGCATTGTGACATTAGTGGGCGGGTTTGCCT
Internal bar code:TGTTTTGATGAGGAAGTCCAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2213
LEAP-Seq percent confirming:96.875
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTCAGCACAGCCTACCAA
Suggested primer 2:CCTTCCTCCCTTCCTGCTTG