Insertion junction: CLIP2.063039_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.063039
Chromosome:chromosome 6
Location:3654272
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278144 (1 of 13) PF01789 - PsbP (PsbP) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAGTGTTTGGTTGTGACATGACGAGCAGGGCCAAGGCGTCTGGAGGTG
Internal bar code:ACTGTGAAGGCCAAGGGATTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1543
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCTGCCATTACCCCCTTC
Suggested primer 2:TATCACCTTCCCCAGCGAGA