Insertion junction: CLIP2.063042_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.063042
Chromosome:chromosome 1
Location:7887215
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g055444 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGGATCCAGAGCAGGGTGATCGTATTCCACGTCACTGGCTCCACGGCAC
Internal bar code:TTAATAATTAGCGCTCAAACGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2150
LEAP-Seq percent confirming:75.7576
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCCGCAAACGTACGAATG
Suggested primer 2:CGCGTTTTGTTGGTGATGGT