Insertion junction: CLIP2.063050_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.063050
Chromosome:chromosome 7
Location:6439614
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g357950 (1 of 1) PF00646//PF12796 - F-box domain (F-box) // Ankyrin repeats (3 copies) (Ank_2) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATGAAAGGAGCGGATAAGCGGACGCGCTGGGCGCGTTAGGATGCGTGGG
Internal bar code:CGGGTGATTATAAGAGGACGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:628
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CCCGCAACACACCTGATACT
Suggested primer 2:TGTGCTGCCTCAGAGACTTG