Insertion junction: CLIP2.063067_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.063067
Chromosome:chromosome 16
Location:1039169
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g649250 (1 of 4) PF13911 - AhpC/TSA antioxidant enzyme (AhpC-TSA_2) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCATTGTACAGCCCGCTAACCTAACCACAGCTTACAGGCCCGCGCTTGC
Internal bar code:CGTGGCATGGGTTAGTTAGAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1392
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:AGCCCTACATGTTCCAAGCC
Suggested primer 2:GGTAAGGGCCTAAGGGGGTA