Insertion junction: CLIP2.063072_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.063072
Chromosome:chromosome 16
Location:5772738
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g680400 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTTCGACGTTCTTCGTTTGGACTGCTGAAATACGGTAGTCTAAGACTAT
Internal bar code:CTATACCTTTAAATCTATTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1879
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:CACACCTGTCACGCTTGTTG
Suggested primer 2:ATTCCTTCAGCTTGGCCTCC