Insertion junction: CLIP2.063074_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.063074
Chromosome:chromosome 10
Location:4224636
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g449350 (1 of 1) PTHR11717//PTHR11717:SF2 - LOW MOLECULAR WEIGHT PROTEIN TYROSINE PHOSPHATASE // PEPTIDYL-TRNA HYDROLASE PTRHD1-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGCGCAGCCTTGCGTCCCTGGGCGCGGGATCCTTGCGTTGGGCGGTTG
Internal bar code:AGGCGCGCAAGTGCCCATGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:6626
LEAP-Seq percent confirming:33.6735
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:65
LEAP-Seq n unique pos:98

Suggested primers for confirmation by PCR

Suggested primer 1:GTCCTTCTGCTCGCTTGAGT
Suggested primer 2:TACAAGGACGAGCCCGAAAC