Insertion junction: CLIP2.063079_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.063079
Chromosome:chromosome 5
Location:2294377
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g238150 (1 of 1) PF07646 - Kelch motif (Kelch_2) 3'UTR
Cre05.g238200 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGCGCCGAGGGCAGCAGTGCTCCGCCCTATGCCTTGCCGTTTCAGGCCG
Internal bar code:ACGACTAATTTATTACAAACCG

Confirmation - LEAP-Seq

LEAP-Seq distance:992
LEAP-Seq percent confirming:96.4286
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:CGTCCTCAACATGGTTCCCA
Suggested primer 2:GATTCTGGCTGGTGCTGACT