Insertion junction: CLIP2.063090_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.063090
Chromosome:chromosome 7
Location:1168741
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g321050 (1 of 1) PTHR11772//PTHR11772:SF3 - ASPARAGINE SYNTHETASE // ASPARAGINE SYNTHETASE DOMAIN-CONTAINING PROTEIN 1 3'UTR
Cre07.g321100 (1 of 1) PTHR10196:SF67 - SEDOHEPTULOKINASE 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACAGTTGATGGGCAGTGCCCCGCAGGCACGCAGGCCTGGACTTCGCTGT
Internal bar code:AATTCTACTCAAATTAGCAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3597
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:CGGCATGGATGATAGGTGCT
Suggested primer 2:GGCTCTAGCGGCTTTCTAGG