Insertion junction: CLIP2.063097_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.063097
Chromosome:chromosome 17
Location:5381309
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g738450 (1 of 5) 2.7.11.7 - [Myosin heavy-chain] kinase / Myosin II heavy-chain kinase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGACGACTAGGCCTGGTGGAAATGGACCTGCGACAAGCCGTTGGTGGGC
Internal bar code:TATTGGTAGGATGCTCTTAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1853
LEAP-Seq percent confirming:79.1667
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:TCTGTGACGTCCTTTGAGCC
Suggested primer 2:GTGAGCAACATCAGAGGGCT