Insertion junction: CLIP2.063098_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.063098
Chromosome:chromosome 6
Location:5731933
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g288400 uS11m,MRPS11 (1 of 3) PF00411 - Ribosomal protein S11 (Ribosomal_S11); Mitochondrial ribosomal protein S11 5'UTR
Cre06.g288450 (1 of 1) PTHR14155//PTHR14155:SF102 - RING FINGER DOMAIN-CONTAINING // RING ZINC FINGER-CONTAINING PROTEIN 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTTCATATACTGCTATCAATAATTATATACTTGTTTCAGCTTACGCTCT
Internal bar code:TCCTGTAAGGCCCTGTACAAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2025
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:CCCAGCAATTGGTAGCTCGA
Suggested primer 2:CGTCTAGCTCCATGCCAGAG