Insertion junction: CLIP2.063101_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.063101
Chromosome:chromosome 3
Location:4313506
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g174300 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCGGCCGCACACGCTCACCCCCAGCTGAGGCCGCACACGCTGTCCCCG
Internal bar code:GTGGGGGTTAGGATATAGCTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2814
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:71
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:71

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGATGGACATGCTGGTGT
Suggested primer 2:GCGTCCTTATCGAGCTCCTC