Insertion junction: CLIP2.063108_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.063108
Chromosome:chromosome 13
Location:2597973
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g580700 DAL2 allantoate deiminase; (1 of 1) 3.5.3.9 - Allantoate deiminase 3'UTR
Cre13.g580750 (1 of 1) K16274 - E3 ubiquitin-protein ligase AIP2 [EC:6.3.2.19] (AIP2) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGAGATGATGGCACGGCCGGCACCAGCGCATTTCTCAGCGGTGTCGAGC
Internal bar code:GGGCGTACGGCGTGGGAATGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2155
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:GTCGTAATGGGCGTCAATGC
Suggested primer 2:CGCGAGAGTATGTTACGGCT