Insertion junction: CLIP2.063110_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.063110
Chromosome:chromosome 6
Location:1271894
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g258733 LEU2 (1 of 1) 2.3.3.13 - 2-isopropylmalate synthase / Isopropylmalate synthetase; Isopropylmalate synthase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGAAGGCGGAGGTGCCGAGCTGGGCACGTCGTGGAATCGGGCGGTTGG
Internal bar code:GAGCGGGCTAGAGTCGTTGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1297
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:TCGTCCACCCCATTCTTGTG
Suggested primer 2:GAGTGGAGGAGCAGGTAGGA