Insertion junction: CLIP2.063112_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.063112
Chromosome:chromosome 3
Location:3764840
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g169450 (1 of 7) IPR000048//IPR027417 - IQ motif, EF-hand binding site // P-loop containing nucleoside triphosphate hydrolase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGCGTCGCATTTGCGCAGCCAGTATGAGGTAGCCCCAGTCACGAAGAA
Internal bar code:GTGTCTTCAGTTGTTAAGGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:736
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:CTTTGCCTTTGAGCACGTCC
Suggested primer 2:GGGTCCCATCCTGGTTCAAG