Insertion junction: CLIP2.063113_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.063113
Chromosome:chromosome 12
Location:685280
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g493000 (1 of 1) IPR006153//IPR020846 - Cation/H+ exchanger // Major facilitator superfamily domain 3'UTR
Cre12.g801351 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTAGGCGCATAGCCTTAGACCGTTCAATGCGAGGGACCCGTCCTAGTGGA
Internal bar code:CTGCAGGCGCCATGCTGGATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:770
LEAP-Seq percent confirming:97.1429
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:CACCCCATTCTCTGTGCCAT
Suggested primer 2:CACCGAACCTACACGTGACA