Insertion junction: CLIP2.063128_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.063128
Chromosome:chromosome 10
Location:6412260
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g464500 PDO1 Protein disulfide oxidoreductase; (1 of 3) PTHR13887//PTHR13887:SF10 - GLUTATHIONE S-TRANSFERASE KAPPA // FRNE PROTEIN-LIKE gene_edge/mRNA_edge/3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTAAAGGCAGTCTTTACAGTGAGTACGCTGTATTGCTCAAGGGGAAGG
Internal bar code:ATTCTATAGGATAATTGATAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:4639
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:70
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:70

Suggested primers for confirmation by PCR

Suggested primer 1:CGCCAAGTATGATGTGTGCG
Suggested primer 2:CGCTGCTTTGCTCAACAACT