Insertion junction: CLIP2.063132_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.063132
Chromosome:chromosome 17
Location:1613646
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g707500 TOC120,TOC159 Translocon at the outer envelope membrane of chloroplasts, receptor subunit; (1 of 1) PF11886 - Translocase of chloroplast 159/132, membrane anchor domain (TOC159_MAD) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCAGAATGCGTGGGCAGCTCCACGGTGCCCGGGGGCGCCCAGTCGTAA
Internal bar code:GGCAAGGTTGAAATCAAGAGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2038
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCGAAGTTATGTTGGCGC
Suggested primer 2:CAGGCATGTCCACTGACCTT