Insertion junction: CLIP2.063137_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.063137
Chromosome:chromosome 16
Location:3779794
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g685929 3'UTR
Cre16.g686285 (1 of 21) IPR011016 - Zinc finger, RING-CH-type 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTAAAACCACAATCACGAAGAGGGGAACCTGACTACGCTTACACAGAC
Internal bar code:TTCTGGGCCTTATAGAGAATGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1576
LEAP-Seq percent confirming:86.3636
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GCTAGCTGCGTGTATTGCAC
Suggested primer 2:TTCGAGTGAGTGACTTGGCC