Insertion junction: CLIP2.063141_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.063141
Chromosome:chromosome 16
Location:3704991
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g680232 (1 of 1) PTHR12509:SF8 - SPERMATOGENESIS-ASSOCIATED PROTEIN 4 3'UTR
Cre16.g680588 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACTCCTGATCGGCTGGTTAGGGCTGCGTTCTTTTGCTGACAAGCGTTCA
Internal bar code:TTTTGCGTTTGAAATATTATCA

Confirmation - LEAP-Seq

LEAP-Seq distance:3439
LEAP-Seq percent confirming:97.4026
LEAP-Seq n confirming:75
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:77

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTTTCCGTTGCCGTTCAG
Suggested primer 2:AGCAGCAGGTGGACAAGATC