Insertion junction: CLIP2.063143_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.063143
Chromosome:chromosome 17
Location:3170767
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre17.g720950 SRD3 3-oxo-5-alpha-steroid 4-dehydrogenase family protein; (1 of 1) 1.3.1.94 - Polyprenol reductase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGGTGTTGATGTCTATGACTGTGACACACGGACTGGGCAGCGCTGCTG
Internal bar code:AGTTTACCGTTCAGCTACAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1181
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCCCAGAAGGACTGCAAG
Suggested primer 2:AGTGACAGCCTCTTTCGGTG