Insertion junction: CLIP2.063144_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.063144
Chromosome:chromosome 6
Location:4193896
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278239 SRP36,SRS7 Serine/arginine-rich pre-mRNA splicing factor; (1 of 2) K12890 - splicing factor, arginine/serine-rich 1/9 (SFRS1_9) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTCTAACCGAGACGAACTCTGGCTTCCGCAACGGCTGACCGCAACTGTT
Internal bar code:TATTTATATCAAGAATAATCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2260
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTTGTTCTGACCGGACTC
Suggested primer 2:ATAGAAGTGGGCGTTGGGTG