Insertion junction: CLIP2.063145_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.063145
Chromosome:chromosome 3
Location:888143
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g146507 SPT2 (1 of 2) 2.3.1.50 - Serine C-palmitoyltransferase; Serine palmitoyltransferase outside_mRNA
Cre03.g146527 GSD1 (1 of 1) 1.2.1.41//2.7.2.11 - Glutamate-5-semialdehyde dehydrogenase / Glutamyl-gamma-semialdehyde dehydrogenase // Glutamate 5-kinase / Gamma-glutamyl kinase; gamma-glutamyl phosphate reductase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTATCCTTAGGTAATAACACAAAAGAGGGAAGGTGGAAGCTGCGCGCTGT
Internal bar code:CCGACTCCGTTTCCGGGTGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1479
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:ATAACCAGGTGCCCCTTGTG
Suggested primer 2:CCAACCCAATCCGTACAGCT