Insertion junction: CLIP2.063152_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.063152
Chromosome:chromosome 14
Location:595847
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g611800 (1 of 781) IPR000104 - Antifreeze protein, type I outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTATTTGATTTTTGGCCACTGCATGCAGTGCCTGCTAGACAAATAAAG
Internal bar code:CCTAAATGTCTATATCTCTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:5562
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:79
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:79

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGTTCGGATTTGGCGTCT
Suggested primer 2:GGCACGCAAACATTTGGAGT