Insertion junction: CLIP2.063162_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.063162
Chromosome:chromosome 11
Location:2701095
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g095071 (1 of 2) K01148 - poly(A)-specific ribonuclease (PARN) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTGCTGAGTTGAGGAAGTATTGTAGCTGTTTGGGTACCTTGTGTGAGAG
Internal bar code:CTTTGTTCCGCTTAAAGGTAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1735
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:CATGGTAGTGATGTTGCGCG
Suggested primer 2:CTAACACACGCACAGGTCCT