Insertion junction: CLIP2.063166_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.063166
Chromosome:chromosome 10
Location:5286657
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g456480 (1 of 39) PTHR13078:SF53 - PROTEIN MAOC-1 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTAACTGGCCGGCAGCCAGTAACATAGGTGACCTGTGCACTAGCCCTG
Internal bar code:TCATAGATGAGCACAAACGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:5382
LEAP-Seq percent confirming:37.5
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CAAAGGCAGTTAGGGGGAGG
Suggested primer 2:CCTGTTCGTGTGCTACCCTT