Insertion junction: CLIP2.063173_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.063173
Chromosome:chromosome 16
Location:3839514
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g688700 (1 of 22) PF01764 - Lipase (class 3) (Lipase_3) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCGGTAAAGGTACAAGTAACTGCCTCGTACCCGGGTGCTGTACCAATGC
Internal bar code:ATGCAGTAATAGTCCAGGCTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1240
LEAP-Seq percent confirming:62.5
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGCCGGAAGAGATTGGTC
Suggested primer 2:GTTGGTTGCATGTGCCGATT