Insertion junction: CLIP2.063175_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.063175
Chromosome:chromosome 16
Location:5318970
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g683700 (1 of 10) PF03798 - TLC domain (TRAM_LAG1_CLN8) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCAGATTTGCACTTGTATGCTACGTTTAGTATAATGGCAATACACAAT
Internal bar code:TACCATTGTGATTAACTTCTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1572
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GGCATCACACCCATCTTCCA
Suggested primer 2:CCCTGGTATGCCATCGCTAG